Data from: Reductions in prolonged swimming capacity following freshwater colonization in multiple threespine stickleback populations.

Version 1.0
Dalziel, Anne C.; Vines, Timothy H.; Schulte, Patricia M., 2011, "Data from: Reductions in prolonged swimming capacity following freshwater colonization in multiple threespine stickleback populations.", https://doi.org/10.5683/SP2/7TB3GJ, Borealis, V1
Learn about Data Citation Standards.
Contact Owner Share
Dataset Metrics
29 Downloads
Description
Abstract
We compared ancestral anadromous-marine and nonmigratory, stream-resident threespine stickleback (Gasterosteus aculeatus) populations to examine the outcome of relaxed selection on prolonged swimming performance. We reared marine and stream-resident fish from two locations in a common environment and found that both stream-resident populations had lower critical swimming speeds (Ucrits) than marine populations. F1 hybrids from the two locations displayed significant differences in dominance, suggesting that the genetic basis for variation in Ucrit differs between locations. To determine which traits evolved in conjunction with, and may underlie, differences in performance capacity we measured a suite of traits known to affect prolonged swimming performance in fishes. While some candidate traits did not evolve (standard metabolic rate and two body shape traits), multiple morphological (pectoral fin size, shape and four body shape measures) and physiological (maximum metabolic rate; MMR) traits evolved in the predicted direction in both stream-resident populations. However, data from F1 hybrids suggested that only one of these traits (MMR) had dominance effects similar to those of Ucrit in both locations. Overall, our data suggest that reductions in prolonged swimming performance were selected for in non-migratory populations of threespine stickleback, and that decreases in MMR may mediate these reductions in performance. (2020-06-24)
Usage notes
R_ScriptR script to re-produce analyses run in Dalziel et al. 2011Fig2_Ucrit_RRaw prolonged swimming speed data (Ucrit) associated with Figure 2Fig3_PecFinSA_RRaw pectoral fin surface area data (residuals of mass and standard length). Figure 3 of Dalziel et al. 2011.PecFinShapelandmarks_UnalignedTPSTPS file of 6 pectoral fin landmarks from Fig.3. Note that these landmarks must be aligned in TpsRelw prior to further analysisFig3_PecFinshape_RRaw data for pectoral fin shape (aligned landmarks), and DFA analysis.Fig4_BodyShape_RCorrected measures of stickleback body shape (see methods) and results of DFA.BodyShape12LandmarksTPS file for use in TmorphGen. Can be used to calculate distances between 12 landmarks from Fig. 4.Fig5_SMR_RRaw standard metabolic rate data.Fig5_MMR_RRaw maximum metabolic rate dataDominanceModelR script for dominance modelDominance_modelUcritdata_RRaw data for testing for differences in dominance among locations (Bonsall and West Creeks)in R. (2020-06-24)
Subject Other
Keyword relaxed selection, F1 hybrids, common garden experiment, maximum metabolic rate, Gasterosteus aculeatus, whole-animal performance trait
Related Publication Article
Notes

Dryad version number: 1

Version status: submitted

Dryad curation status: Published

Sharing link: https://datadryad.org/stash/share/TtPf7LdW9o78tCgnIjQlz6sQIXvDfiUBnboV9MG4dcs

Storage size: 294142

Visibility: public

License/Data Use Agreement

Custom Dataset Terms

Filter by
1 to 10 of 12 Files
BodyShape12Landmarks.TPS
Unknown - 94.2 KB
Published May 19, 2021
1 Download
MD5: 05cc4e0c844ef6785ae52829a25b0db8
TPS file for use in TmorphGen. Can be used to calculate distances between 12 landmarks from Fig. 4.
DominanceModel.txt
Plain Text - 1.3 KB
Published May 19, 2021
2 Downloads
MD5: ff5e157d478b98d7924f7001acd599b9
R script for dominance model
Preview "DominanceModel.txt"
Dominance_modelUcritdata_R.csv
Unknown - 8.4 KB
Published May 19, 2021
3 Downloads
MD5: d2c4f32d9dead958242c2dc9a2922d6a
Raw data for testing for differences in dominance among locations (Bonsall and West Creeks)in R.
dryad_5hj47mh6.json
Plain Text - 6.3 KB
Published May 19, 2021
1 Download
MD5: 62f743c2d61edf78fa17d88ab9b34521
Original JSON from Dryad
DocumentationCode
Fig2_Ucrit_R.csv
Unknown - 5.0 KB
Published May 19, 2021
3 Downloads
MD5: 1d4a00f33c865f8e7e41873b712c0682
Raw prolonged swimming speed data (Ucrit) associated with Figure 2
Fig3_PecFinSA_R.csv
Unknown - 9.7 KB
Published May 19, 2021
3 Downloads
MD5: 3375b3aa8c9d7e9c6f349e3dc47d5d80
Raw pectoral fin surface area data (residuals of mass and standard length). Figure 3 of Dalziel et al. 2011.
Fig3_PecFinshape_R.csv
Unknown - 47.5 KB
Published May 19, 2021
3 Downloads
MD5: 3201672780747b55d554dee4d82aa4d9
Raw data for pectoral fin shape (aligned landmarks), and DFA analysis.
Fig4_BodyShape_R.csv
Unknown - 38.8 KB
Published May 19, 2021
3 Downloads
MD5: dc8c8b8e2831f16829dcbe3445f7137a
Corrected measures of stickleback body shape (see methods) and results of DFA.
Fig5_MMR_R.csv
Unknown - 3.1 KB
Published May 19, 2021
3 Downloads
MD5: ea0a80bc3724e900069e7b5e11dd4423
Raw maximum metabolic rate data
Fig5_SMR_R.csv
Unknown - 1.1 KB
Published May 19, 2021
3 Downloads
MD5: a7684d8d002fbbc811d2514fdbcd43e3
Raw standard metabolic rate data.
Edit File

This file has already been deleted (or replaced) in the current version. It may not be edited.

Restrict Access

Restricting limits access to published files. People who want to use the restricted files can request access by default. If you disable request access, you must add information about access to the Terms of Access field.

Learn about restricting files and dataset access in the User Guide.

Enable access request
You must enable request access or add terms of access to restrict file access.
Save Changes
Edit Embargo

The selected file or files have already been published. Contact an administrator to change the embargo date or reason of the file or files.
Delete Files

The file will be deleted after you click on the Delete button.

Files will not be removed from previously published versions of the dataset.

Select File(s)

Please select one or more files.

Share Dataset

Share this dataset on your favorite social media networks.

Dataset Citations

Citations for this dataset are retrieved from Crossref via DataCite using Make Data Count standards. For more information about dataset metrics, please refer to the User Guide.

Sorry, no citations were found.
Restricted Files Selected

The selected file(s) may not be downloaded because you have not been granted access.

Download Options

The files selected are too large to download as a ZIP.

You can select individual files that are below the 4.7 GB download limit from the files table, or use the Data Access API for programmatic access to the files.

Select File(s)

Please select a file or files to be downloaded.

Restricted Files Selected

The restricted file(s) selected may not be downloaded because you have not been granted access.

Click Continue to download the files you have access to download.

Delete Dataset

Are you sure you want to delete this dataset and all of its files? You cannot undelete this dataset.

Delete Draft Version

Are you sure you want to delete this draft version? Files will be reverted to the most recently published version. You cannot undelete this draft.

Unpublished Dataset Private URL

Private URL can only be used with unpublished versions of datasets.

Unpublished Dataset Private URL

Are you sure you want to disable the Private URL? If you have shared the Private URL with others they will no longer be able to use it to access your unpublished dataset.

Delete Files

The file(s) will be deleted after you click on the Delete button.

Files will not be removed from previously published versions of the dataset.

Compute

This dataset contains restricted files you may not compute on because you have not been granted access.

Deaccession Dataset

Are you sure you want to deaccession? The selected version(s) will no longer be viewable by the public.

Deaccession Dataset

Are you sure you want to deaccession this dataset? It will no longer be viewable by the public.

Version Differences Details

Please select two versions to view the differences.

Version Differences Details
 
Version:
Last Updated:
Version:
Last Updated:
Select File(s)

Please select a file or files for access request.

Select File(s)

Embargoed files cannot be accessed. Please select an unembargoed file or files for your access request.

Edit Tags

Select existing file tags or create new tags to describe your files. Each file can have more than one tag.

Request Access

  You need to Sign Up or Log In to request access.

Dataset Terms

This dataset is made available under the following terms. Please confirm and/or complete the information needed below in order to continue.

Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation shown on the dataset page.

Custom Dataset Terms — the following Custom Dataset Terms have been defined for this dataset.

This dataset is made available under a Creative Commons CC0 license with the following additional/modified terms and conditions: CC0 Waiver
Preview Guestbook

Upon downloading files the guestbook asks for the following information.

Account Information

Package File Download

Use the Download URL in a Wget command or a download manager to download this package file. Download via web browser is not recommended. User Guide - Downloading a Dataverse Package via URL

https://borealisdata.ca/api/access/datafile/

Request Access

Please confirm and/or complete the information needed below in order to request access to files in this dataset.

Compute Batch
Clear Batch
Dataset Persistent Identifier Change Compute Batch
Compute Batch
Submit for Review

You will not be able to make changes to this dataset while it is in review.

Publish Dataset

Are you sure you want to republish this dataset?

Select if this is a minor or major version update.

Publish Dataset

This dataset cannot be published until UBC Dryad2Dataverse is published by its administrator.

Publish Dataset

This dataset cannot be published until UBC Dryad2Dataverse and UBC Dataverse Collection are published.

Return to Author

Return this dataset to contributor for modification.