Much of the data used to conduct the bioinformatic analyses in Chapter 3 of my PhD thesis consists of large tables that are unsuitable for the thesis format. I have therefore uploaded them to the University of Toronto Dataverse under the following filename so they are accessible to those who wish to view them: Deecker_Shayna_R_202211_PhD_datatables.xlsx. The contents of the tables are as follows: Table S1: The Legionella pneumophila isolates used in this study. Table S2: The hits for each L. pneumophila spacer from metagenomic sequences. Table S3: The hits for each L. pneumophila spacer in complete and/or draft genomes. Table S4: The accession numbers and Microviridae subfamily classifications for the major capsid phylogeny tree. Table S5: The mobile elements predicted by both PhiSpy and VirSorter. Table S6: Orthologous groups for LME-1 and their predicted function by BLASTp against the viral database (taxid:10239) and by HHpred against the Uniprot SwissProt viral database (Uniprot-SwissProt-versio-70_23_aug_2020) with a probability cutoff of >70%. Table S7: List of CRISPR-Cas spacers from all examined L. pneumophila isolates.
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Deecker_Shayna_R_202211_PhD_datatables
Sep 10, 2022
Deecker, Shayna, 2022, "Deecker_Shayna_R_202211_PhD_datatables", https://doi.org/10.5683/SP3/4MWFOI, Borealis, V1, UNF:6:6bBZH7qcQmVJx1Z2KzUcZQ== [fileUNF]
Much of the data used to conduct the bioinformatic analyses in Chapter 3 of my PhD thesis consists of large tables that are unsuitable for the thesis format. They are available here under the filename: Deecker_Shayna_R_202211_PhD_datatables.xlsx. The contents of the tables are as...
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